Welcome to Northern Arizona SNP Pipeline’s documentation!

Contents:

• Installation
  • Install
  • Update
  • Uninstall
  • Dependencies
  • Optional aligners for fastq files
  • Optional snpcallers for bam/fastq files:
• Usage
  • nasp
  • format_fasta
  • find_duplicates
  • frankenfasta
  • matrix
• Contributing
  • Types of Contributions
  • Get Started!
  • Pull Request Guidelines
  • Tips
• Credits
  • Development Lead
  • Contributors
• History
  • 1.0.0 (2014-06-05)
  • 0.9.6 (2014-06-05)
• Academic and Research License

Indices and tables

• Index
• Module Index
• Search Page